Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 CROCCP5-201ENST00000436658 830 ntBASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BOLA2-SMG1P6H3BVE0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 KRT8P50-201ENST00000562022 1438 ntBASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.7□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 LINC01311-201ENST00000565162 1445 ntBASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLC29A4P1-201ENST00000398760 971 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms