Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 AC034105.1-201ENST00000563488 319 ntBASIC17.11■□□□□ 0.33
CAPN8A6NHC0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 AC239800.4-201ENST00000603712 296 ntBASIC17.11■□□□□ 0.33
CAPN8A6NHC0 AC004790.2-201ENST00000623588 572 ntBASIC17.11■□□□□ 0.33
CAPN8A6NHC0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.11■□□□□ 0.33
CAPN8A6NHC0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 FLJ38576-201ENST00000623820 2459 ntBASIC17.1■□□□□ 0.33
CAPN8A6NHC0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 RPSAP43-201ENST00000402237 625 ntBASIC17.1■□□□□ 0.33
CAPN8A6NHC0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 PRSS29P-201ENST00000440800 595 ntBASIC17.1■□□□□ 0.33
CAPN8A6NHC0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 SLC25A6P2-201ENST00000497974 877 ntBASIC17.1■□□□□ 0.33
CAPN8A6NHC0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 DUX4L17-201ENST00000557360 1267 ntBASIC17.1■□□□□ 0.33
CAPN8A6NHC0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 MIR4751-201ENST00000578027 74 ntBASIC17.1■□□□□ 0.33
CAPN8A6NHC0 AC092364.2-202ENST00000597012 1073 ntBASIC17.1■□□□□ 0.33
CAPN8A6NHC0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 AC010654.1-201ENST00000615722 808 ntBASIC17.1■□□□□ 0.33
CAPN8A6NHC0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CAPN8A6NHC0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 LINC02199-201ENST00000506655 2702 ntBASIC17.09■□□□□ 0.33
CAPN8A6NHC0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 GPX1P2-201ENST00000429271 606 ntBASIC17.09■□□□□ 0.33
CAPN8A6NHC0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 AC002310.6-201ENST00000624451 1377 ntBASIC17.09■□□□□ 0.33
CAPN8A6NHC0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.09■□□□□ 0.33
CAPN8A6NHC0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms