Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 HLA-A-202ENST00000376806 1854 ntBASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 AL391256.1-201ENST00000443260 1855 ntBASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 AL021920.2-201ENST00000624828 1351 ntBASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPDC1A2A3K4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 RPS8P6-201ENST00000426177 609 ntBASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 AP002490.2-201ENST00000524791 560 ntBASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 AC002310.6-201ENST00000624451 1377 ntBASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPDC1A2A3K4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 KRT8P49-201ENST00000604166 1432 ntBASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 IGLL3P-201ENST00000412472 434 ntBASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 PAWRP1-201ENST00000451083 565 ntBASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.77■□□□□ 0.76
PTPDC1A2A3K4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPDC1A2A3K4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTPDC1A2A3K4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 AC092183.1-201ENST00000469884 875 ntBASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 AL513190.1-201ENST00000621254 727 ntBASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 AC079328.2-201ENST00000561241 3354 ntBASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PTPDC1A2A3K4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms