Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 HBZP1-201ENST00000354915 429 ntBASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 AL359075.1-203ENST00000462729 1002 ntBASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TCRBV3S1A0A5B6 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV3S1A0A5B6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV3S1A0A5B6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV3S1A0A5B6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV3S1A0A5B6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV3S1A0A5B6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TCRBV3S1A0A5B6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 RN7SL606P-201ENST00000472779 293 ntBASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 AL512652.2-201ENST00000625156 1716 ntBASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TCRBV3S1A0A5B6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 AL845331.1-201ENST00000424978 1190 ntBASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 AC073592.5-201ENST00000624854 528 ntBASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TCRBV3S1A0A5B6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms