Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 AC064862.7-201ENST00000604520 867 ntBASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 TOP3BP1-201ENST00000420768 1380 ntBASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TCRBV9S1A1TA0A576 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV9S1A1TA0A576 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.96■□□□□ 0.3
TCRBV9S1A1TA0A576 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.96■□□□□ 0.3
TCRBV9S1A1TA0A576 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TCRBV9S1A1TA0A576 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.96■□□□□ 0.3
TCRBV9S1A1TA0A576 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.96■□□□□ 0.3
TCRBV9S1A1TA0A576 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 AC024909.3-201ENST00000611513 2257 ntBASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 AL591684.3-201ENST00000605187 298 ntBASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 AP000550.4-202ENST00000639755 178 ntBASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 NCF1C-201ENST00000438382 1427 ntBASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 AL596087.1-201ENST00000400979 1969 ntBASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TCRBV9S1A1TA0A576 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 AL512652.2-201ENST00000625156 1716 ntBASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.94■□□□□ 0.3
TCRBV9S1A1TA0A576 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms