Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC144831.1-201ENST00000573312 2656 ntBASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRBV6-7A0A0A0MS04 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 AL021920.2-201ENST00000624828 1351 ntBASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 LINC02228-204ENST00000642115 2962 ntBASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 AP002414.1-201ENST00000391405 1147 ntBASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 IGHV3-47-201ENST00000425060 335 ntBASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 TOB2P1-201ENST00000469761 992 ntBASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 SIGLEC16-201ENST00000599858 1437 ntBASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC114341.1-201ENST00000618070 349 ntBASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 LINC00895-201ENST00000629028 1637 ntBASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC006058.4-201ENST00000624016 1670 ntBASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 POM121L3P-201ENST00000419331 1163 ntBASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 AP002383.4-201ENST00000442518 975 ntBASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 HLA-J-202ENST00000469281 1241 ntBASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-7A0A0A0MS04 FAM45BP-202ENST00000592932 1624 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms