Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 AC087641.1-201ENST00000557561 1021 ntBASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CSNK1G3Q9Y6M4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.46■□□□□ 0.22
CSNK1G3Q9Y6M4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CSNK1G3Q9Y6M4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 RNU1-129P-201ENST00000384064 167 ntBASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 U1.21-201ENST00000580816 167 ntBASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 AC005498.2-205ENST00000593218 784 ntBASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 AL645608.8-201ENST00000606034 2086 ntBASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CSNK1G3Q9Y6M4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 GPS2P2-201ENST00000430745 888 ntBASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 AC051619.7-201ENST00000568314 623 ntBASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 AL031055.1-201ENST00000606362 631 ntBASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 AC093525.9-201ENST00000624961 1746 ntBASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CSNK1G3Q9Y6M4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.43■□□□□ 0.22
CSNK1G3Q9Y6M4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms