Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 CSF2RBP1-201ENST00000447905 391 ntBASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 ZNF767P-206ENST00000513792 565 ntBASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
ARFGEF1Q9Y6D6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 CTBP2P5-201ENST00000454986 1264 ntBASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 MIR8072-201ENST00000614241 80 ntBASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 AL033527.5-202ENST00000641632 1098 ntBASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.24■□□□□ 0.83
ARFGEF1Q9Y6D6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 MEP1AP4-201ENST00000423244 1087 ntBASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AC061975.2-201ENST00000581722 295 ntBASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AL021920.2-201ENST00000624828 1351 ntBASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 BRWD1P1-201ENST00000401091 371 ntBASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 RNA5SP412-201ENST00000516234 123 ntBASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 AL391069.4-201ENST00000609583 481 ntBASIC20.23■□□□□ 0.83
ARFGEF1Q9Y6D6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 GOLGA2P4-201ENST00000441462 777 ntBASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 AC233724.13-201ENST00000598383 410 ntBASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.22■□□□□ 0.83
ARFGEF1Q9Y6D6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms