Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 KRT8P49-201ENST00000604166 1432 ntBASIC18.83■□□□□ 0.6
COL4A3BPQ9Y5P4 AC025580.3-201ENST00000617932 1424 ntBASIC18.83■□□□□ 0.6
COL4A3BPQ9Y5P4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 FLJ38576-201ENST00000623820 2459 ntBASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 AP002490.2-201ENST00000524791 560 ntBASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 PCDHB17P-201ENST00000539533 2393 ntBASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A3BPQ9Y5P4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 AC107918.2-201ENST00000530817 355 ntBASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 TOP3BP1-201ENST00000420768 1380 ntBASIC18.81■□□□□ 0.6
COL4A3BPQ9Y5P4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 AC124067.4-201ENST00000519691 2379 ntBASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 RNF216P1-203ENST00000404404 2427 ntBASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL4A3BPQ9Y5P4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.79■□□□□ 0.6
COL4A3BPQ9Y5P4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms