Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
AP4E1Q9UPM8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
AP4E1Q9UPM8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4E1Q9UPM8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.48■□□□□ 0.39
AP4E1Q9UPM8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP4E1Q9UPM8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP4E1Q9UPM8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.48■□□□□ 0.39
AP4E1Q9UPM8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 AL139011.1-202ENST00000642063 584 ntBASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4E1Q9UPM8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4E1Q9UPM8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.46■□□□□ 0.38
AP4E1Q9UPM8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
AP4E1Q9UPM8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.46■□□□□ 0.38
AP4E1Q9UPM8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 AC006538.1-201ENST00000567905 1585 ntBASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 HLA-J-202ENST00000469281 1241 ntBASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 Z83851.2-201ENST00000609564 659 ntBASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 ACTL9-202ENST00000612068 1252 ntBASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 SNX33P1-201ENST00000592116 1762 ntBASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
AP4E1Q9UPM8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4E1Q9UPM8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
AP4E1Q9UPM8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4E1Q9UPM8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4E1Q9UPM8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
AP4E1Q9UPM8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
AP4E1Q9UPM8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms