Protein–RNA interactions for Protein: Q9UHC6

CNTNAP2, Contactin-associated protein-like 2, humanhuman

Predictions only

Length 1,331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2Q9UHC6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 SPDYE11-202ENST00000450699 704 ntBASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 SPDYE9P-201ENST00000570642 692 ntBASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 SPDYE10P-202ENST00000612005 668 ntBASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 SPDYE8P-202ENST00000612377 668 ntBASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 AC006277.1-201ENST00000624348 1610 ntBASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 AKAP8P1-201ENST00000434743 1349 ntBASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNTNAP2Q9UHC6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 AL139400.1-201ENST00000366220 510 ntBASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 HLA-J-203ENST00000494367 1087 ntBASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 AL135744.1-201ENST00000565098 629 ntBASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 AL645728.1-201ENST00000366221 2101 ntBASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNTNAP2Q9UHC6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 KRT8P48-201ENST00000515599 1220 ntBASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 AC093028.1-201ENST00000622998 982 ntBASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNTNAP2Q9UHC6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms