Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 AL139424.1-201ENST00000607572 797 ntBASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.08■□□□□ 0.32
NCKIPSDQ9NZQ3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 CRYGEP-201ENST00000412192 528 ntBASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 AC112482.1-201ENST00000492080 688 ntBASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCKIPSDQ9NZQ3 AL049757.1-201ENST00000616842 1596 ntBASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 AC002310.6-201ENST00000624451 1377 ntBASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 PCDHB19P-201ENST00000570871 2371 ntBASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 PRSS29P-201ENST00000440800 595 ntBASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 AP001160.2-201ENST00000596071 487 ntBASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms