Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 MIR4469-201ENST00000583919 79 ntBASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 AC013467.2-201ENST00000605472 835 ntBASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 AP001350.2-201ENST00000625104 1094 ntBASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.19■□□□□ 0.18
SPHK1Q9NYA1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 RNU1-129P-201ENST00000384064 167 ntBASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 U1.21-201ENST00000580816 167 ntBASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 SNX33P1-201ENST00000592116 1762 ntBASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SPHK1Q9NYA1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 MKNK2P1-201ENST00000437526 628 ntBASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 YBX1P5-201ENST00000509441 847 ntBASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 AL009183.1-201ENST00000603760 355 ntBASIC16.17■□□□□ 0.18
SPHK1Q9NYA1 AL031055.1-201ENST00000606362 631 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms