Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 AC011498.5-201ENST00000592027 486 ntBASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 AL121956.5-201ENST00000625261 221 ntBASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB16Q9NRJ7 AC007950.2-201ENST00000615045 2347 ntBASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 AL353593.2-201ENST00000602529 1483 ntBASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 AC026691.1-201ENST00000602502 2017 ntBASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 AC083849.1-201ENST00000615227 514 ntBASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 KRT8P10-201ENST00000450021 1447 ntBASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHB16Q9NRJ7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 AC105917.1-201ENST00000506637 2539 ntBASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 GPR89P-201ENST00000407924 1495 ntBASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 AC007326.2-201ENST00000624224 7579 ntBASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 AL136038.3-201ENST00000561909 1096 ntBASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 AC087388.1-201ENST00000571370 1112 ntBASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 AC009336.1-201ENST00000608941 1553 ntBASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDHB16Q9NRJ7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHB16Q9NRJ7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDHB16Q9NRJ7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.71□□□□□ -0.06
PCDHB16Q9NRJ7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms