Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 HLA-V-204ENST00000476601 1289 ntBASIC17.76■□□□□ 0.43
TLR9Q9NR96 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 CYP2A7P1-201ENST00000595391 815 ntBASIC17.76■□□□□ 0.43
TLR9Q9NR96 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TLR9Q9NR96 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TLR9Q9NR96 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 SPTLC1P1-201ENST00000447199 261 ntBASIC17.75■□□□□ 0.43
TLR9Q9NR96 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 AL021920.2-201ENST00000624828 1351 ntBASIC17.75■□□□□ 0.43
TLR9Q9NR96 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.75■□□□□ 0.43
TLR9Q9NR96 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TLR9Q9NR96 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 KRT8P49-201ENST00000604166 1432 ntBASIC17.74■□□□□ 0.43
TLR9Q9NR96 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 LINC00896-202ENST00000609602 2128 ntBASIC17.74■□□□□ 0.43
TLR9Q9NR96 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TLR9Q9NR96 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TLR9Q9NR96 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms