Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.16■□□□□ 0.18
PIF1Q9H611 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.16■□□□□ 0.18
PIF1Q9H611 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PIF1Q9H611 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.16■□□□□ 0.18
PIF1Q9H611 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PIF1Q9H611 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PIF1Q9H611 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
PIF1Q9H611 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.15■□□□□ 0.18
PIF1Q9H611 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.15■□□□□ 0.18
PIF1Q9H611 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.15■□□□□ 0.18
PIF1Q9H611 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.15■□□□□ 0.18
PIF1Q9H611 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.15■□□□□ 0.18
PIF1Q9H611 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.15■□□□□ 0.18
PIF1Q9H611 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.15■□□□□ 0.18
PIF1Q9H611 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.15■□□□□ 0.18
PIF1Q9H611 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PIF1Q9H611 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 RN7SL606P-201ENST00000472779 293 ntBASIC16.15■□□□□ 0.18
PIF1Q9H611 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.15■□□□□ 0.18
PIF1Q9H611 IGHV3-41-201ENST00000613121 348 ntBASIC16.15■□□□□ 0.18
PIF1Q9H611 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.15■□□□□ 0.18
PIF1Q9H611 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.15■□□□□ 0.18
PIF1Q9H611 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PIF1Q9H611 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.15■□□□□ 0.18
PIF1Q9H611 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PIF1Q9H611 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
PIF1Q9H611 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.14■□□□□ 0.18
PIF1Q9H611 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
PIF1Q9H611 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PIF1Q9H611 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
PIF1Q9H611 AL645929.1-201ENST00000420084 975 ntBASIC16.14■□□□□ 0.17
PIF1Q9H611 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.14■□□□□ 0.17
PIF1Q9H611 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PIF1Q9H611 AC011840.4-201ENST00000578471 627 ntBASIC16.14■□□□□ 0.17
PIF1Q9H611 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 AC132938.5-201ENST00000624980 1813 ntBASIC16.14■□□□□ 0.17
PIF1Q9H611 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PIF1Q9H611 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.14■□□□□ 0.17
PIF1Q9H611 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PIF1Q9H611 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PIF1Q9H611 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PIF1Q9H611 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PIF1Q9H611 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms