Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 DFFB-212ENST00000625756 649 ntTSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 IER3-202ENST00000376377 1350 ntBASIC10.11□□□□□ -0.79
LIMD2Q9BT23 OR2I1P-210ENST00000642037 4691 ntBASIC10.11□□□□□ -0.79
LIMD2Q9BT23 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
LIMD2Q9BT23 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 AC005332.1-201ENST00000577698 1310 ntBASIC10.1□□□□□ -0.79
LIMD2Q9BT23 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 AC125634.1-201ENST00000438758 1403 ntBASIC10.1□□□□□ -0.79
LIMD2Q9BT23 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 REXO1L11P-201ENST00000620964 1927 ntBASIC10.1□□□□□ -0.79
LIMD2Q9BT23 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 AC003669.1-201ENST00000334569 611 ntBASIC10.1□□□□□ -0.79
LIMD2Q9BT23 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 TSSC2-201ENST00000450217 709 ntBASIC10.1□□□□□ -0.79
LIMD2Q9BT23 RN7SL606P-201ENST00000472779 293 ntBASIC10.1□□□□□ -0.79
LIMD2Q9BT23 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 NDUFV2-AS1-203ENST00000608008 779 ntBASIC10.1□□□□□ -0.79
LIMD2Q9BT23 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.1□□□□□ -0.79
LIMD2Q9BT23 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
LIMD2Q9BT23 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms