Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.41■□□□□ 0.06
SNX18Q96RF0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNX18Q96RF0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 TPSP2-201ENST00000561760 610 ntBASIC15.4■□□□□ 0.06
SNX18Q96RF0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 AC073592.5-201ENST00000624854 528 ntBASIC15.4■□□□□ 0.06
SNX18Q96RF0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.4■□□□□ 0.06
SNX18Q96RF0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SNX18Q96RF0 GPR89P-201ENST00000407924 1495 ntBASIC15.4■□□□□ 0.06
SNX18Q96RF0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SNX18Q96RF0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNX18Q96RF0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNX18Q96RF0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNX18Q96RF0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 AC092384.3-202ENST00000564646 2873 ntBASIC15.39■□□□□ 0.05
SNX18Q96RF0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 AC092053.1-201ENST00000605787 1936 ntBASIC15.39■□□□□ 0.05
SNX18Q96RF0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNX18Q96RF0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNX18Q96RF0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 TOB2P1-201ENST00000469761 992 ntBASIC15.39■□□□□ 0.05
SNX18Q96RF0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 RN7SL510P-201ENST00000581311 263 ntBASIC15.39■□□□□ 0.05
SNX18Q96RF0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNX18Q96RF0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SNX18Q96RF0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNX18Q96RF0 PMPCAP1-201ENST00000508114 1576 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms