Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNPS1P1-201ENST00000507437 918 ntBASIC15.97■□□□□ 0.15
COL21A1Q96P44 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 AL160237.2-201ENST00000556165 472 ntBASIC15.97■□□□□ 0.15
COL21A1Q96P44 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 AC104692.2-201ENST00000603054 253 ntBASIC15.97■□□□□ 0.15
COL21A1Q96P44 AC064862.7-201ENST00000604520 867 ntBASIC15.97■□□□□ 0.15
COL21A1Q96P44 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 FRMD8P1-201ENST00000440433 1524 ntBASIC15.97■□□□□ 0.15
COL21A1Q96P44 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
COL21A1Q96P44 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.97■□□□□ 0.15
COL21A1Q96P44 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 AC026691.1-201ENST00000602502 2017 ntBASIC15.96■□□□□ 0.15
COL21A1Q96P44 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 AP002469.2-201ENST00000531724 424 ntBASIC15.96■□□□□ 0.15
COL21A1Q96P44 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 AL589182.2-201ENST00000619332 1049 ntBASIC15.96■□□□□ 0.15
COL21A1Q96P44 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
COL21A1Q96P44 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 AC092171.3-201ENST00000610122 2651 ntBASIC15.96■□□□□ 0.15
COL21A1Q96P44 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.96■□□□□ 0.15
COL21A1Q96P44 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
COL21A1Q96P44 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
COL21A1Q96P44 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.96■□□□□ 0.14
COL21A1Q96P44 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.96■□□□□ 0.14
COL21A1Q96P44 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 NCF1C-201ENST00000438382 1427 ntBASIC15.95■□□□□ 0.14
COL21A1Q96P44 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 ACTG1P4-201ENST00000425123 1122 ntBASIC15.95■□□□□ 0.14
COL21A1Q96P44 KRT18P67-201ENST00000432816 1264 ntBASIC15.95■□□□□ 0.14
COL21A1Q96P44 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 AL121894.2-201ENST00000602977 491 ntBASIC15.95■□□□□ 0.14
COL21A1Q96P44 AC025062.2-201ENST00000605477 670 ntBASIC15.95■□□□□ 0.14
COL21A1Q96P44 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.95■□□□□ 0.14
COL21A1Q96P44 LINC02199-201ENST00000506655 2702 ntBASIC15.95■□□□□ 0.14
COL21A1Q96P44 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL21A1Q96P44 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL21A1Q96P44 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms