Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC006538.1-201ENST00000567905 1585 ntBASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHAMP1Q96JM3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 TUBB8P12-201ENST00000308911 1335 ntBASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 TUBB7P-202ENST00000428444 1305 ntBASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 TUBB8P7-204ENST00000567960 1332 ntBASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 AP002414.1-201ENST00000391405 1147 ntBASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 LINC00982-205ENST00000420957 435 ntBASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 AP002414.4-201ENST00000589764 1148 ntBASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 AL596087.1-201ENST00000400979 1969 ntBASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHAMP1Q96JM3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 LINC00895-201ENST00000629028 1637 ntBASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 DUSP5P1-201ENST00000441325 1139 ntBASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 KRT17P6-201ENST00000453795 1220 ntBASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 AL121672.3-201ENST00000608644 468 ntBASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.54■□□□□ 0.72
CHAMP1Q96JM3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 TSSC2-201ENST00000450217 709 ntBASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHAMP1Q96JM3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms