Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.99□□□□□ -0.01
RFT1Q96AA3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RFT1Q96AA3 AC092384.3-202ENST00000564646 2873 ntBASIC14.99□□□□□ -0.01
RFT1Q96AA3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 DBET-201ENST00000630918 3363 ntBASIC14.98□□□□□ -0.01
RFT1Q96AA3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 COX5BP2-201ENST00000392354 334 ntBASIC14.98□□□□□ -0.01
RFT1Q96AA3 AL645929.1-201ENST00000420084 975 ntBASIC14.98□□□□□ -0.01
RFT1Q96AA3 AC007967.3-201ENST00000434308 558 ntBASIC14.98□□□□□ -0.01
RFT1Q96AA3 AC002558.1-201ENST00000488906 803 ntBASIC14.98□□□□□ -0.01
RFT1Q96AA3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 AC124947.2-201ENST00000547118 1133 ntBASIC14.98□□□□□ -0.01
RFT1Q96AA3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RFT1Q96AA3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RFT1Q96AA3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 AC063952.2-201ENST00000498792 1227 ntBASIC14.97□□□□□ -0.01
RFT1Q96AA3 GUSBP12-201ENST00000513727 720 ntBASIC14.97□□□□□ -0.01
RFT1Q96AA3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 AC022616.7-201ENST00000525383 220 ntBASIC14.97□□□□□ -0.01
RFT1Q96AA3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 RN7SL850P-201ENST00000579959 291 ntBASIC14.97□□□□□ -0.01
RFT1Q96AA3 AC124864.1-201ENST00000623408 392 ntBASIC14.97□□□□□ -0.01
RFT1Q96AA3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.97□□□□□ -0.01
RFT1Q96AA3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RFT1Q96AA3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.96□□□□□ -0.01
RFT1Q96AA3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RFT1Q96AA3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms