Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TM9SF4Q92544 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TM9SF4Q92544 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 BCAR1-209ENST00000546196 1340 ntBASIC15.94■□□□□ 0.14
TM9SF4Q92544 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 AC023141.13-201ENST00000604991 943 ntBASIC15.94■□□□□ 0.14
TM9SF4Q92544 AL078644.1-201ENST00000609881 752 ntBASIC15.94■□□□□ 0.14
TM9SF4Q92544 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 AC009949.1-201ENST00000623048 1830 ntBASIC15.94■□□□□ 0.14
TM9SF4Q92544 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.94■□□□□ 0.14
TM9SF4Q92544 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TM9SF4Q92544 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 AC004877.2-201ENST00000623941 599 ntBASIC15.93■□□□□ 0.14
TM9SF4Q92544 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.93■□□□□ 0.14
TM9SF4Q92544 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TM9SF4Q92544 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF4Q92544 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.92■□□□□ 0.14
TM9SF4Q92544 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TM9SF4Q92544 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.92■□□□□ 0.14
TM9SF4Q92544 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF4Q92544 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.92■□□□□ 0.14
TM9SF4Q92544 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TM9SF4Q92544 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.92■□□□□ 0.14
TM9SF4Q92544 PCDHA14-201ENST00000506751 2298 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms