Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 SUPT20HL2-201ENST00000486479 2409 ntBASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 AC116562.2-201ENST00000507042 360 ntBASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 MIR3917-201ENST00000580971 93 ntBASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 MIR5787-201ENST00000611784 55 ntBASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 AC092865.7-201ENST00000641832 219 ntBASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SMIM11BQ8TCY0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 AP005117.1-202ENST00000581724 1908 ntBASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 SLC25A1P2-201ENST00000430693 912 ntBASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 HLA-J-202ENST00000469281 1241 ntBASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 GRAMD4P8-201ENST00000605465 1115 ntBASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 GPR89P-201ENST00000407924 1495 ntBASIC10.97□□□□□ -0.65
SMIM11BQ8TCY0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms