Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC148Q8NFR7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 AC006277.1-201ENST00000624348 1610 ntBASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 RNA5SP416-201ENST00000516838 111 ntBASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 AC140113.2-201ENST00000604370 208 ntBASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 AP001350.2-201ENST00000625104 1094 ntBASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC148Q8NFR7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC148Q8NFR7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC148Q8NFR7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC148Q8NFR7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
CCDC148Q8NFR7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC148Q8NFR7 AL391256.1-201ENST00000443260 1855 ntBASIC19.39■□□□□ 0.7
CCDC148Q8NFR7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 FER1L4-210ENST00000615531 5998 ntBASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 PMS2P1-201ENST00000431037 1228 ntBASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 AC087641.1-201ENST00000557561 1021 ntBASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 MIR4492-201ENST00000581627 80 ntBASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 SLC22A20-204ENST00000530038 1673 ntBASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC148Q8NFR7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 AL645728.1-201ENST00000366221 2101 ntBASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 RHOQP3-201ENST00000437982 621 ntBASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC148Q8NFR7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms