Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 DUX4L27-201ENST00000554796 1261 ntBASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 KRT8P23-201ENST00000560090 1207 ntBASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 AL138918.1-201ENST00000568306 659 ntBASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 AC015911.4-201ENST00000588022 1070 ntBASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 AC005498.2-205ENST00000593218 784 ntBASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC38A9Q8NBW4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AC106820.2-201ENST00000563775 3264 ntBASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 FAM86GP-201ENST00000448322 971 ntBASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AL390955.2-201ENST00000603032 514 ntBASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AL671710.1-201ENST00000610245 2349 ntBASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AP001059.3-201ENST00000619053 235 ntBASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 LINC00895-201ENST00000629028 1637 ntBASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC38A9Q8NBW4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.8■□□□□ 0.12
SLC38A9Q8NBW4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms