Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPS6Q86YV9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS6Q86YV9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.7■□□□□ 0.26
HPS6Q86YV9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 AL356309.3-201ENST00000624132 1934 ntBASIC16.69■□□□□ 0.26
HPS6Q86YV9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 AC091607.1-201ENST00000490318 1060 ntBASIC16.69■□□□□ 0.26
HPS6Q86YV9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 AC106730.1-201ENST00000566722 1090 ntBASIC16.69■□□□□ 0.26
HPS6Q86YV9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 AL355877.3-201ENST00000622820 899 ntBASIC16.69■□□□□ 0.26
HPS6Q86YV9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPS6Q86YV9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HPS6Q86YV9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 AC139530.3-201ENST00000620344 690 ntBASIC16.68■□□□□ 0.26
HPS6Q86YV9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 FER1L4-210ENST00000615531 5998 ntBASIC16.68■□□□□ 0.26
HPS6Q86YV9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HPS6Q86YV9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS6Q86YV9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HPS6Q86YV9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 ZNF259P1-201ENST00000407656 1365 ntBASIC16.67■□□□□ 0.26
HPS6Q86YV9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS6Q86YV9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS6Q86YV9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HPS6Q86YV9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS6Q86YV9 AC018712.1-201ENST00000455767 687 ntBASIC16.67■□□□□ 0.26
HPS6Q86YV9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HPS6Q86YV9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS6Q86YV9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.67■□□□□ 0.26
HPS6Q86YV9 AC139887.3-201ENST00000568585 713 ntBASIC16.67■□□□□ 0.26
HPS6Q86YV9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS6Q86YV9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms