Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 MIR6869-201ENST00000619434 62 ntBASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 CYP2A7P1-201ENST00000595391 815 ntBASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 CETN4P-206ENST00000642099 2168 ntBASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 EGFEM1P-202ENST00000431685 1563 ntBASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 TUBB1P2-201ENST00000422712 1306 ntBASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 TUBB1P1-201ENST00000503144 1300 ntBASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13BQ7Z7G8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AC087499.6-201ENST00000411576 835 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AL583810.1-201ENST00000553344 1045 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AL138688.1-201ENST00000624851 1594 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AC018665.1-201ENST00000622927 1362 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 SPDYE19P-201ENST00000338590 713 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AC098850.1-201ENST00000419919 790 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 SNX33P1-201ENST00000592116 1762 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 RNU1-129P-201ENST00000384064 167 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 U1.21-201ENST00000580816 167 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 FAM220BP-201ENST00000377689 816 ntBASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13BQ7Z7G8 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms