Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 HCG4-201ENST00000418983 998 ntBASIC16.15■□□□□ 0.18
RNF44Q7L0R7 MCCD1P2-201ENST00000423228 335 ntBASIC16.15■□□□□ 0.18
RNF44Q7L0R7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 MPDU1-223ENST00000582151 728 ntBASIC16.15■□□□□ 0.18
RNF44Q7L0R7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 AL645728.2-201ENST00000641974 660 ntBASIC16.15■□□□□ 0.18
RNF44Q7L0R7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF44Q7L0R7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RNF44Q7L0R7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.14■□□□□ 0.18
RNF44Q7L0R7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 YBX2P1-201ENST00000394192 760 ntBASIC16.14■□□□□ 0.17
RNF44Q7L0R7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 MIR4515-201ENST00000584082 81 ntBASIC16.14■□□□□ 0.17
RNF44Q7L0R7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF44Q7L0R7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 DNAJB3-201ENST00000446806 729 ntBASIC16.13■□□□□ 0.17
RNF44Q7L0R7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF44Q7L0R7 AL031432.2-201ENST00000566714 459 ntBASIC16.13■□□□□ 0.17
RNF44Q7L0R7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms