Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 IGHV3-62-201ENST00000520057 340 ntBASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CTC1Q2NKJ3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 AL139384.1-201ENST00000612143 3047 ntBASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 PIN1P1-201ENST00000412108 996 ntBASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 COX5BP8-201ENST00000416911 349 ntBASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 AC018695.7-201ENST00000624587 2492 ntBASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTC1Q2NKJ3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 MRPS18AP1-201ENST00000414458 589 ntBASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 AL023806.1-201ENST00000603994 1649 ntBASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 UXT-AS1-201ENST00000590504 1525 ntBASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.96■□□□□ 0.47
CTC1Q2NKJ3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
CTC1Q2NKJ3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
CTC1Q2NKJ3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.95■□□□□ 0.46
CTC1Q2NKJ3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms