Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 HLA-H-201ENST00000383620 1096 ntBASIC20.03■□□□□ 0.8
PDS5AQ29RF7 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.03■□□□□ 0.8
PDS5AQ29RF7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 AC020916.1-201ENST00000587762 1774 ntBASIC20.03■□□□□ 0.8
PDS5AQ29RF7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 AP3S2-216ENST00000617003 1561 ntBASIC20.03■□□□□ 0.8
PDS5AQ29RF7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDS5AQ29RF7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 AC055876.3-201ENST00000431496 288 ntBASIC20.02■□□□□ 0.8
PDS5AQ29RF7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.02■□□□□ 0.8
PDS5AQ29RF7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 AC138649.4-201ENST00000612222 287 ntBASIC20.02■□□□□ 0.8
PDS5AQ29RF7 AC020765.3-201ENST00000613051 740 ntBASIC20.02■□□□□ 0.8
PDS5AQ29RF7 AC007967.4-201ENST00000614700 386 ntBASIC20.02■□□□□ 0.8
PDS5AQ29RF7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDS5AQ29RF7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 MIR3197-201ENST00000582241 73 ntBASIC20.02■□□□□ 0.79
PDS5AQ29RF7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.02■□□□□ 0.79
PDS5AQ29RF7 AC018529.1-201ENST00000613063 361 ntBASIC20.02■□□□□ 0.79
PDS5AQ29RF7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 AC098859.1-201ENST00000502915 1238 ntBASIC20.01■□□□□ 0.79
PDS5AQ29RF7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms