Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
EFNB3Q15768 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNB3Q15768 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EFNB3Q15768 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.34□□□□□ -0.11
EFNB3Q15768 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EFNB3Q15768 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.33□□□□□ -0.11
EFNB3Q15768 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
EFNB3Q15768 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNB3Q15768 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.33□□□□□ -0.11
EFNB3Q15768 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.33□□□□□ -0.11
EFNB3Q15768 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNB3Q15768 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.33□□□□□ -0.11
EFNB3Q15768 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.33□□□□□ -0.11
EFNB3Q15768 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNB3Q15768 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNB3Q15768 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.33□□□□□ -0.11
EFNB3Q15768 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
EFNB3Q15768 AC084018.2-201ENST00000613093 2607 ntBASIC14.33□□□□□ -0.11
EFNB3Q15768 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
EFNB3Q15768 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EFNB3Q15768 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
EFNB3Q15768 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNB3Q15768 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 AD000864.1-201ENST00000624076 2295 ntBASIC14.33□□□□□ -0.12
EFNB3Q15768 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
EFNB3Q15768 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.33□□□□□ -0.12
EFNB3Q15768 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 TFAMP1-201ENST00000412727 736 ntBASIC14.33□□□□□ -0.12
EFNB3Q15768 METTL21AP1-201ENST00000438852 635 ntBASIC14.33□□□□□ -0.12
EFNB3Q15768 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNB3Q15768 TIMM8BP1-201ENST00000452384 211 ntBASIC14.33□□□□□ -0.12
EFNB3Q15768 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
EFNB3Q15768 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNB3Q15768 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
EFNB3Q15768 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.33□□□□□ -0.12
EFNB3Q15768 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
EFNB3Q15768 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
EFNB3Q15768 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 AC124067.4-201ENST00000519691 2379 ntBASIC14.32□□□□□ -0.12
EFNB3Q15768 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB3Q15768 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
EFNB3Q15768 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB3Q15768 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB3Q15768 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB3Q15768 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.32□□□□□ -0.12
EFNB3Q15768 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.32□□□□□ -0.12
EFNB3Q15768 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.32□□□□□ -0.12
EFNB3Q15768 CYP2A7P1-201ENST00000595391 815 ntBASIC14.32□□□□□ -0.12
EFNB3Q15768 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.32□□□□□ -0.12
EFNB3Q15768 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
EFNB3Q15768 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.32□□□□□ -0.12
EFNB3Q15768 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
EFNB3Q15768 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.32□□□□□ -0.12
EFNB3Q15768 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms