Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 AC091167.2-201ENST00000579581 588 ntBASIC18.49■□□□□ 0.55
KCNA1Q09470 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.49■□□□□ 0.55
KCNA1Q09470 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.49■□□□□ 0.55
KCNA1Q09470 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNA1Q09470 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNA1Q09470 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNA1Q09470 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KCNA1Q09470 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.49■□□□□ 0.55
KCNA1Q09470 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
KCNA1Q09470 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNA1Q09470 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNA1Q09470 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
KCNA1Q09470 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
KCNA1Q09470 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.48■□□□□ 0.55
KCNA1Q09470 AC096734.2-201ENST00000562054 433 ntBASIC18.48■□□□□ 0.55
KCNA1Q09470 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNA1Q09470 AC005412.3-201ENST00000580309 715 ntBASIC18.48■□□□□ 0.55
KCNA1Q09470 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNA1Q09470 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNA1Q09470 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
KCNA1Q09470 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
KCNA1Q09470 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KCNA1Q09470 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
KCNA1Q09470 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
KCNA1Q09470 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.48■□□□□ 0.55
KCNA1Q09470 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KCNA1Q09470 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
KCNA1Q09470 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.47■□□□□ 0.55
KCNA1Q09470 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.47■□□□□ 0.55
KCNA1Q09470 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.47■□□□□ 0.55
KCNA1Q09470 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.47■□□□□ 0.55
KCNA1Q09470 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
KCNA1Q09470 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.47■□□□□ 0.55
KCNA1Q09470 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.47■□□□□ 0.55
KCNA1Q09470 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.47■□□□□ 0.55
KCNA1Q09470 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.47■□□□□ 0.55
KCNA1Q09470 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.47■□□□□ 0.55
KCNA1Q09470 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 CYP2A7P1-201ENST00000595391 815 ntBASIC18.47■□□□□ 0.55
KCNA1Q09470 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.47■□□□□ 0.55
KCNA1Q09470 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
KCNA1Q09470 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.47■□□□□ 0.55
KCNA1Q09470 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
KCNA1Q09470 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA1Q09470 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
KCNA1Q09470 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA1Q09470 MIR940-201ENST00000401276 94 ntBASIC18.46■□□□□ 0.55
KCNA1Q09470 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KCNA1Q09470 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.46■□□□□ 0.55
KCNA1Q09470 MED15P5-201ENST00000423150 992 ntBASIC18.46■□□□□ 0.55
KCNA1Q09470 AL513480.1-201ENST00000451731 511 ntBASIC18.46■□□□□ 0.55
KCNA1Q09470 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.46■□□□□ 0.55
KCNA1Q09470 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.46■□□□□ 0.55
KCNA1Q09470 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.46■□□□□ 0.55
KCNA1Q09470 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.46■□□□□ 0.55
KCNA1Q09470 AC027601.4-201ENST00000611259 610 ntBASIC18.46■□□□□ 0.55
KCNA1Q09470 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.46■□□□□ 0.55
KCNA1Q09470 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA1Q09470 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.46■□□□□ 0.55
KCNA1Q09470 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.46■□□□□ 0.55
KCNA1Q09470 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KCNA1Q09470 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
KCNA1Q09470 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
KCNA1Q09470 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.45■□□□□ 0.54
KCNA1Q09470 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.45■□□□□ 0.54
KCNA1Q09470 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA1Q09470 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.45■□□□□ 0.54
KCNA1Q09470 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA1Q09470 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
KCNA1Q09470 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KCNA1Q09470 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms