Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD47Q08722 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CD47Q08722 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD47Q08722 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD47Q08722 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD47Q08722 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD47Q08722 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CD47Q08722 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD47Q08722 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CD47Q08722 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CD47Q08722 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.69■□□□□ 0.1
CD47Q08722 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.69■□□□□ 0.1
CD47Q08722 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
CD47Q08722 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CD47Q08722 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CD47Q08722 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CD47Q08722 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.69■□□□□ 0.1
CD47Q08722 VENTXP7-201ENST00000475503 772 ntBASIC15.69■□□□□ 0.1
CD47Q08722 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.69■□□□□ 0.1
CD47Q08722 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.69■□□□□ 0.1
CD47Q08722 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.69■□□□□ 0.1
CD47Q08722 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.69■□□□□ 0.1
CD47Q08722 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.69■□□□□ 0.1
CD47Q08722 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.69■□□□□ 0.1
CD47Q08722 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.69■□□□□ 0.1
CD47Q08722 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD47Q08722 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD47Q08722 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.69■□□□□ 0.1
CD47Q08722 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.68■□□□□ 0.1
CD47Q08722 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.68■□□□□ 0.1
CD47Q08722 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 AC010460.3-201ENST00000511359 1579 ntBASIC15.68■□□□□ 0.1
CD47Q08722 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.68■□□□□ 0.1
CD47Q08722 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.68■□□□□ 0.1
CD47Q08722 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.68■□□□□ 0.1
CD47Q08722 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CD47Q08722 RN7SL606P-201ENST00000472779 293 ntBASIC15.68■□□□□ 0.1
CD47Q08722 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CD47Q08722 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.68■□□□□ 0.1
CD47Q08722 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.68■□□□□ 0.1
CD47Q08722 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CD47Q08722 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.68■□□□□ 0.1
CD47Q08722 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.68■□□□□ 0.1
CD47Q08722 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.68■□□□□ 0.1
CD47Q08722 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.68■□□□□ 0.1
CD47Q08722 AC097374.2-201ENST00000618617 1306 ntBASIC15.68■□□□□ 0.1
CD47Q08722 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD47Q08722 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms