Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.6■□□□□ 0.73
IRX3P78415 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
IRX3P78415 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.6■□□□□ 0.73
IRX3P78415 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
IRX3P78415 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 AC018695.7-201ENST00000624587 2492 ntBASIC19.6■□□□□ 0.73
IRX3P78415 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IRX3P78415 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.6■□□□□ 0.73
IRX3P78415 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.59■□□□□ 0.73
IRX3P78415 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.59■□□□□ 0.73
IRX3P78415 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 SPDYE7P-202ENST00000420373 878 ntBASIC19.59■□□□□ 0.73
IRX3P78415 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 IGHV3-42-201ENST00000520410 361 ntBASIC19.59■□□□□ 0.73
IRX3P78415 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 LINC01225-203ENST00000563550 1244 ntBASIC19.59■□□□□ 0.73
IRX3P78415 AC026150.2-201ENST00000564693 1156 ntBASIC19.59■□□□□ 0.73
IRX3P78415 AC140878.1-201ENST00000565277 250 ntBASIC19.59■□□□□ 0.73
IRX3P78415 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.59■□□□□ 0.73
IRX3P78415 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
IRX3P78415 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.59■□□□□ 0.73
IRX3P78415 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.59■□□□□ 0.73
IRX3P78415 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.59■□□□□ 0.73
IRX3P78415 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IRX3P78415 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IRX3P78415 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.58■□□□□ 0.73
IRX3P78415 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.58■□□□□ 0.73
IRX3P78415 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IRX3P78415 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IRX3P78415 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
IRX3P78415 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
IRX3P78415 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.58■□□□□ 0.73
IRX3P78415 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.58■□□□□ 0.72
IRX3P78415 HCG4-201ENST00000418983 998 ntBASIC19.58■□□□□ 0.72
IRX3P78415 AC244107.1-201ENST00000442033 332 ntBASIC19.58■□□□□ 0.72
IRX3P78415 TERF1P3-201ENST00000505638 1227 ntBASIC19.58■□□□□ 0.72
IRX3P78415 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
IRX3P78415 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.58■□□□□ 0.72
IRX3P78415 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.58■□□□□ 0.72
IRX3P78415 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
IRX3P78415 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.58■□□□□ 0.72
IRX3P78415 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
IRX3P78415 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
IRX3P78415 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.58■□□□□ 0.72
IRX3P78415 WASH6P-202ENST00000359512 1437 ntBASIC19.58■□□□□ 0.72
IRX3P78415 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.58■□□□□ 0.72
IRX3P78415 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
IRX3P78415 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IRX3P78415 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 FO538757.1-201ENST00000623083 1397 ntBASIC19.57■□□□□ 0.72
IRX3P78415 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
IRX3P78415 AC008677.1-201ENST00000519230 1561 ntBASIC19.57■□□□□ 0.72
IRX3P78415 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
IRX3P78415 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.57■□□□□ 0.72
IRX3P78415 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
IRX3P78415 AC012317.2-201ENST00000623305 2251 ntBASIC19.57■□□□□ 0.72
IRX3P78415 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.57■□□□□ 0.72
IRX3P78415 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.57■□□□□ 0.72
IRX3P78415 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IRX3P78415 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms