Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDE1AP54750 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 PCDH8P1-201ENST00000428983 2773 ntBASIC20.52■□□□□ 0.88
PDE1AP54750 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 GGT3P-204ENST00000453783 1664 ntBASIC20.52■□□□□ 0.88
PDE1AP54750 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE1AP54750 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE1AP54750 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.52■□□□□ 0.88
PDE1AP54750 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.52■□□□□ 0.88
PDE1AP54750 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.52■□□□□ 0.88
PDE1AP54750 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.52■□□□□ 0.88
PDE1AP54750 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDE1AP54750 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PDE1AP54750 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PDE1AP54750 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDE1AP54750 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.52■□□□□ 0.87
PDE1AP54750 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PDE1AP54750 ME2P1-201ENST00000426028 1970 ntBASIC20.52■□□□□ 0.87
PDE1AP54750 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.52■□□□□ 0.87
PDE1AP54750 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.52■□□□□ 0.87
PDE1AP54750 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PDE1AP54750 AC092364.2-201ENST00000596710 2692 ntBASIC20.51■□□□□ 0.87
PDE1AP54750 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE1AP54750 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDE1AP54750 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PDE1AP54750 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.51■□□□□ 0.87
PDE1AP54750 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE1AP54750 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE1AP54750 AC145285.3-201ENST00000564603 959 ntBASIC20.51■□□□□ 0.87
PDE1AP54750 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.51■□□□□ 0.87
PDE1AP54750 Z83851.2-201ENST00000609564 659 ntBASIC20.51■□□□□ 0.87
PDE1AP54750 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.51■□□□□ 0.87
PDE1AP54750 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE1AP54750 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.51■□□□□ 0.87
PDE1AP54750 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDE1AP54750 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PDE1AP54750 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.51■□□□□ 0.87
PDE1AP54750 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDE1AP54750 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE1AP54750 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PDE1AP54750 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDE1AP54750 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.5■□□□□ 0.87
PDE1AP54750 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE1AP54750 AC034105.1-201ENST00000563488 319 ntBASIC20.5■□□□□ 0.87
PDE1AP54750 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE1AP54750 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.5■□□□□ 0.87
PDE1AP54750 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE1AP54750 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.5■□□□□ 0.87
PDE1AP54750 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE1AP54750 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.5■□□□□ 0.87
PDE1AP54750 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.5■□□□□ 0.87
PDE1AP54750 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 TNRC18P3-201ENST00000441896 2691 ntBASIC20.5■□□□□ 0.87
PDE1AP54750 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDE1AP54750 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.49■□□□□ 0.87
PDE1AP54750 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 AC012569.1-201ENST00000591191 1524 ntBASIC20.49■□□□□ 0.87
PDE1AP54750 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDE1AP54750 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PDE1AP54750 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDE1AP54750 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDE1AP54750 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms