Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AL133417.1-201ENST00000425290 688 ntTSL 5 BASIC16.75■□□□□ 0.27
NUBP1P53384 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NUBP1P53384 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC16.75■□□□□ 0.27
NUBP1P53384 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC16.75■□□□□ 0.27
NUBP1P53384 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC16.75■□□□□ 0.27
NUBP1P53384 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.75■□□□□ 0.27
NUBP1P53384 SERBP1P3-201ENST00000459980 809 ntBASIC16.75■□□□□ 0.27
NUBP1P53384 AC090680.1-201ENST00000464696 860 ntBASIC16.75■□□□□ 0.27
NUBP1P53384 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 LARP7P4-201ENST00000481075 878 ntBASIC16.75■□□□□ 0.27
NUBP1P53384 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.75■□□□□ 0.27
NUBP1P53384 AC112206.4-201ENST00000515142 405 ntBASIC16.75■□□□□ 0.27
NUBP1P53384 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.75■□□□□ 0.27
NUBP1P53384 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC16.75■□□□□ 0.27
NUBP1P53384 RRP7BP-205ENST00000566851 833 ntBASIC16.75■□□□□ 0.27
NUBP1P53384 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.75■□□□□ 0.27
NUBP1P53384 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.75■□□□□ 0.27
NUBP1P53384 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NUBP1P53384 AC008735.3-201ENST00000596646 500 ntBASIC16.75■□□□□ 0.27
NUBP1P53384 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.75■□□□□ 0.27
NUBP1P53384 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NUBP1P53384 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.75■□□□□ 0.27
NUBP1P53384 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.75■□□□□ 0.27
NUBP1P53384 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUBP1P53384 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
NUBP1P53384 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUBP1P53384 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUBP1P53384 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NUBP1P53384 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUBP1P53384 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NUBP1P53384 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NUBP1P53384 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NUBP1P53384 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUBP1P53384 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUBP1P53384 BRWD1P1-201ENST00000401091 371 ntBASIC16.74■□□□□ 0.27
NUBP1P53384 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.74■□□□□ 0.27
NUBP1P53384 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC16.74■□□□□ 0.27
NUBP1P53384 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.74■□□□□ 0.27
NUBP1P53384 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC16.74■□□□□ 0.27
NUBP1P53384 MTND1P31-201ENST00000449206 961 ntBASIC16.74■□□□□ 0.27
NUBP1P53384 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.74■□□□□ 0.27
NUBP1P53384 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC16.74■□□□□ 0.27
NUBP1P53384 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.74■□□□□ 0.27
NUBP1P53384 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.74■□□□□ 0.27
NUBP1P53384 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.74■□□□□ 0.27
NUBP1P53384 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.74■□□□□ 0.27
NUBP1P53384 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC16.74■□□□□ 0.27
NUBP1P53384 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.74■□□□□ 0.27
NUBP1P53384 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.74■□□□□ 0.27
NUBP1P53384 AL451086.1-201ENST00000605596 223 ntBASIC16.74■□□□□ 0.27
NUBP1P53384 AC093726.1-201ENST00000608064 963 ntBASIC16.74■□□□□ 0.27
NUBP1P53384 AL139099.5-201ENST00000635274 300 ntBASIC16.74■□□□□ 0.27
NUBP1P53384 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUBP1P53384 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUBP1P53384 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NUBP1P53384 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUBP1P53384 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC16.73■□□□□ 0.27
NUBP1P53384 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NUBP1P53384 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
NUBP1P53384 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NUBP1P53384 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NUBP1P53384 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.73■□□□□ 0.27
NUBP1P53384 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
NUBP1P53384 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NUBP1P53384 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.73■□□□□ 0.27
NUBP1P53384 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC16.73■□□□□ 0.27
NUBP1P53384 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.73■□□□□ 0.27
NUBP1P53384 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUBP1P53384 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.73■□□□□ 0.27
NUBP1P53384 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.73■□□□□ 0.27
NUBP1P53384 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NUBP1P53384 ELK1P1-201ENST00000485699 580 ntBASIC16.73■□□□□ 0.27
NUBP1P53384 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC16.73■□□□□ 0.27
NUBP1P53384 AC105021.1-202ENST00000570572 669 ntBASIC16.73■□□□□ 0.27
NUBP1P53384 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NUBP1P53384 BTNL10-201ENST00000595971 695 ntBASIC16.73■□□□□ 0.27
NUBP1P53384 AC016542.1-201ENST00000608259 493 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms