Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC16.57■□□□□ 0.24
GTF2A1P52655 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.57■□□□□ 0.24
GTF2A1P52655 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
GTF2A1P52655 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
GTF2A1P52655 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 MYLKP1-201ENST00000509077 1580 ntBASIC16.56■□□□□ 0.24
GTF2A1P52655 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
GTF2A1P52655 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.56■□□□□ 0.24
GTF2A1P52655 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.56■□□□□ 0.24
GTF2A1P52655 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GTF2A1P52655 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 AC097658.1-201ENST00000475555 843 ntBASIC16.56■□□□□ 0.24
GTF2A1P52655 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.56■□□□□ 0.24
GTF2A1P52655 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 AC008687.6-201ENST00000596318 630 ntBASIC16.56■□□□□ 0.24
GTF2A1P52655 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
GTF2A1P52655 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.56■□□□□ 0.24
GTF2A1P52655 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 Z82170.1-201ENST00000625081 3192 ntBASIC16.56■□□□□ 0.24
GTF2A1P52655 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.56■□□□□ 0.24
GTF2A1P52655 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GTF2A1P52655 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.55■□□□□ 0.24
GTF2A1P52655 KRT8P41-201ENST00000533985 1514 ntBASIC16.55■□□□□ 0.24
GTF2A1P52655 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GTF2A1P52655 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GTF2A1P52655 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GTF2A1P52655 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GTF2A1P52655 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.55■□□□□ 0.24
GTF2A1P52655 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 AC026396.1-201ENST00000419388 421 ntBASIC16.55■□□□□ 0.24
GTF2A1P52655 GUSBP6-202ENST00000438529 1198 ntBASIC16.55■□□□□ 0.24
GTF2A1P52655 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.55■□□□□ 0.24
GTF2A1P52655 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
GTF2A1P52655 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.55■□□□□ 0.24
GTF2A1P52655 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.55■□□□□ 0.24
GTF2A1P52655 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.55■□□□□ 0.24
GTF2A1P52655 AC068587.9-201ENST00000641814 219 ntBASIC16.55■□□□□ 0.24
GTF2A1P52655 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.55■□□□□ 0.24
GTF2A1P52655 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.55■□□□□ 0.24
GTF2A1P52655 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GTF2A1P52655 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms