Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.42□□□□□ -0.58
CXCL5P42830 SLC25A3P1-201ENST00000443844 931 ntBASIC11.42□□□□□ -0.58
CXCL5P42830 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC11.42□□□□□ -0.58
CXCL5P42830 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.42□□□□□ -0.58
CXCL5P42830 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
CXCL5P42830 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
CXCL5P42830 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.42□□□□□ -0.58
CXCL5P42830 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC11.42□□□□□ -0.58
CXCL5P42830 AL441883.1-201ENST00000566170 1045 ntBASIC11.42□□□□□ -0.58
CXCL5P42830 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.42□□□□□ -0.58
CXCL5P42830 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CXCL5P42830 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
CXCL5P42830 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC11.42□□□□□ -0.58
CXCL5P42830 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.42□□□□□ -0.58
CXCL5P42830 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CXCL5P42830 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CXCL5P42830 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CXCL5P42830 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC11.41□□□□□ -0.58
CXCL5P42830 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.41□□□□□ -0.58
CXCL5P42830 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.41□□□□□ -0.58
CXCL5P42830 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.41□□□□□ -0.58
CXCL5P42830 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 BX664615.1-201ENST00000443558 458 ntBASIC11.41□□□□□ -0.58
CXCL5P42830 DANCR-204ENST00000444958 709 ntTSL 3 BASIC11.41□□□□□ -0.58
CXCL5P42830 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CXCL5P42830 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.41□□□□□ -0.58
CXCL5P42830 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
CXCL5P42830 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.41□□□□□ -0.58
CXCL5P42830 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.41□□□□□ -0.58
CXCL5P42830 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CXCL5P42830 AC009336.1-201ENST00000608941 1553 ntBASIC11.41□□□□□ -0.58
CXCL5P42830 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CXCL5P42830 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CXCL5P42830 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.4□□□□□ -0.58
CXCL5P42830 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.4□□□□□ -0.58
CXCL5P42830 FRMD8P1-201ENST00000440433 1524 ntBASIC11.4□□□□□ -0.58
CXCL5P42830 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC11.4□□□□□ -0.58
CXCL5P42830 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CXCL5P42830 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CXCL5P42830 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.4□□□□□ -0.58
CXCL5P42830 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.4□□□□□ -0.58
CXCL5P42830 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms