Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HADHAP40939 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HADHAP40939 KRT18P27-201ENST00000427733 1299 ntBASIC17.07■□□□□ 0.32
HADHAP40939 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
HADHAP40939 FDX1P1-201ENST00000449115 551 ntBASIC17.07■□□□□ 0.32
HADHAP40939 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.07■□□□□ 0.32
HADHAP40939 AL160237.2-201ENST00000556165 472 ntBASIC17.07■□□□□ 0.32
HADHAP40939 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.07■□□□□ 0.32
HADHAP40939 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.07■□□□□ 0.32
HADHAP40939 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.07■□□□□ 0.32
HADHAP40939 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HADHAP40939 TERC-201ENST00000602385 541 ntBASIC17.07■□□□□ 0.32
HADHAP40939 MIR1199-201ENST00000621445 119 ntBASIC17.07■□□□□ 0.32
HADHAP40939 AC008735.5-201ENST00000623544 497 ntBASIC17.07■□□□□ 0.32
HADHAP40939 AL805961.1-202ENST00000641562 540 ntBASIC17.07■□□□□ 0.32
HADHAP40939 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.07■□□□□ 0.32
HADHAP40939 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HADHAP40939 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HADHAP40939 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.07■□□□□ 0.32
HADHAP40939 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HADHAP40939 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HADHAP40939 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.06■□□□□ 0.32
HADHAP40939 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.06■□□□□ 0.32
HADHAP40939 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
HADHAP40939 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.06■□□□□ 0.32
HADHAP40939 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HADHAP40939 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HADHAP40939 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.06■□□□□ 0.32
HADHAP40939 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.06■□□□□ 0.32
HADHAP40939 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.06■□□□□ 0.32
HADHAP40939 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.06■□□□□ 0.32
HADHAP40939 ELK2BP-201ENST00000415014 1224 ntBASIC17.06■□□□□ 0.32
HADHAP40939 AC136632.2-201ENST00000512891 861 ntBASIC17.06■□□□□ 0.32
HADHAP40939 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.06■□□□□ 0.32
HADHAP40939 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.06■□□□□ 0.32
HADHAP40939 AP002469.2-201ENST00000531724 424 ntBASIC17.06■□□□□ 0.32
HADHAP40939 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.06■□□□□ 0.32
HADHAP40939 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.06■□□□□ 0.32
HADHAP40939 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.06■□□□□ 0.32
HADHAP40939 AC104692.2-201ENST00000603054 253 ntBASIC17.06■□□□□ 0.32
HADHAP40939 AL773604.1-201ENST00000617417 272 ntBASIC17.06■□□□□ 0.32
HADHAP40939 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
HADHAP40939 PGM5P2-202ENST00000637225 1043 ntBASIC17.06■□□□□ 0.32
HADHAP40939 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.06■□□□□ 0.32
HADHAP40939 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
HADHAP40939 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HADHAP40939 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 AC006504.4-201ENST00000592118 1568 ntBASIC17.06■□□□□ 0.32
HADHAP40939 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HADHAP40939 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.05■□□□□ 0.32
HADHAP40939 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.05■□□□□ 0.32
HADHAP40939 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HADHAP40939 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HADHAP40939 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.05■□□□□ 0.32
HADHAP40939 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.05■□□□□ 0.32
HADHAP40939 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.05■□□□□ 0.32
HADHAP40939 PTCHD3P3-201ENST00000403073 906 ntBASIC17.05■□□□□ 0.32
HADHAP40939 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms