Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC8P31273 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.16■□□□□ 0.5
HOXC8P31273 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC8P31273 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC8P31273 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC8P31273 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HOXC8P31273 AC061975.2-201ENST00000581722 295 ntBASIC18.16■□□□□ 0.5
HOXC8P31273 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC8P31273 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.16■□□□□ 0.5
HOXC8P31273 AL358472.5-202ENST00000641448 1267 ntBASIC18.16■□□□□ 0.5
HOXC8P31273 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC8P31273 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
HOXC8P31273 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HOXC8P31273 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HOXC8P31273 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HOXC8P31273 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HOXC8P31273 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.15■□□□□ 0.5
HOXC8P31273 COX5BP8-201ENST00000416911 349 ntBASIC18.15■□□□□ 0.5
HOXC8P31273 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 NME2P1-201ENST00000426182 414 ntBASIC18.15■□□□□ 0.5
HOXC8P31273 MTND6P24-201ENST00000440466 518 ntBASIC18.15■□□□□ 0.5
HOXC8P31273 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
HOXC8P31273 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.15■□□□□ 0.5
HOXC8P31273 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXC8P31273 AC027307.3-201ENST00000594262 1100 ntBASIC18.15■□□□□ 0.5
HOXC8P31273 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.15■□□□□ 0.5
HOXC8P31273 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HOXC8P31273 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HOXC8P31273 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
HOXC8P31273 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
HOXC8P31273 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
HOXC8P31273 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
HOXC8P31273 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
HOXC8P31273 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
HOXC8P31273 AC141586.5-201ENST00000624546 2050 ntBASIC18.14■□□□□ 0.5
HOXC8P31273 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.14■□□□□ 0.5
HOXC8P31273 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.14■□□□□ 0.5
HOXC8P31273 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.14■□□□□ 0.5
HOXC8P31273 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.14■□□□□ 0.5
HOXC8P31273 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
HOXC8P31273 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.14■□□□□ 0.49
HOXC8P31273 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HOXC8P31273 AL589702.1-201ENST00000641229 1509 ntBASIC18.14■□□□□ 0.49
HOXC8P31273 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXC8P31273 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.14■□□□□ 0.49
HOXC8P31273 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HOXC8P31273 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.14■□□□□ 0.49
HOXC8P31273 AC244107.1-201ENST00000442033 332 ntBASIC18.14■□□□□ 0.49
HOXC8P31273 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.14■□□□□ 0.49
HOXC8P31273 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.14■□□□□ 0.49
HOXC8P31273 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXC8P31273 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXC8P31273 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.14■□□□□ 0.49
HOXC8P31273 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HOXC8P31273 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HOXC8P31273 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 AC007613.1-201ENST00000572811 2597 ntBASIC18.14■□□□□ 0.49
HOXC8P31273 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.14■□□□□ 0.49
HOXC8P31273 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.14■□□□□ 0.49
HOXC8P31273 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HOXC8P31273 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms