Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
VARSP26640 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
VARSP26640 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.64■□□□□ 0.25
VARSP26640 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
VARSP26640 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 AC106730.1-201ENST00000566722 1090 ntBASIC16.64■□□□□ 0.25
VARSP26640 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.64■□□□□ 0.25
VARSP26640 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.64■□□□□ 0.25
VARSP26640 AC008608.2-201ENST00000606089 416 ntBASIC16.64■□□□□ 0.25
VARSP26640 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.64■□□□□ 0.25
VARSP26640 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 EGFEM1P-202ENST00000431685 1563 ntBASIC16.64■□□□□ 0.25
VARSP26640 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
VARSP26640 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.63■□□□□ 0.25
VARSP26640 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.63■□□□□ 0.25
VARSP26640 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VARSP26640 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VARSP26640 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.63■□□□□ 0.25
VARSP26640 FGFR3P6-201ENST00000457012 610 ntBASIC16.63■□□□□ 0.25
VARSP26640 SCARNA2-201ENST00000458748 420 ntBASIC16.63■□□□□ 0.25
VARSP26640 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.63■□□□□ 0.25
VARSP26640 AC073648.2-201ENST00000510116 352 ntBASIC16.63■□□□□ 0.25
VARSP26640 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 SART3-203ENST00000546611 1184 ntBASIC16.63■□□□□ 0.25
VARSP26640 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC16.63■□□□□ 0.25
VARSP26640 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.63■□□□□ 0.25
VARSP26640 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.63■□□□□ 0.25
VARSP26640 AL355877.3-201ENST00000622820 899 ntBASIC16.63■□□□□ 0.25
VARSP26640 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.63■□□□□ 0.25
VARSP26640 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.63■□□□□ 0.25
VARSP26640 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.63■□□□□ 0.25
VARSP26640 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VARSP26640 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.62■□□□□ 0.25
VARSP26640 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.62■□□□□ 0.25
VARSP26640 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 HYMAI-201ENST00000635591 3347 ntBASIC16.62■□□□□ 0.25
VARSP26640 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
VARSP26640 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.62■□□□□ 0.25
VARSP26640 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
VARSP26640 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 LINC00982-205ENST00000420957 435 ntBASIC16.62■□□□□ 0.25
VARSP26640 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.62■□□□□ 0.25
VARSP26640 RNA5SP419-201ENST00000515908 135 ntBASIC16.62■□□□□ 0.25
VARSP26640 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.62■□□□□ 0.25
VARSP26640 AC092865.5-201ENST00000545435 363 ntBASIC16.62■□□□□ 0.25
VARSP26640 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.62■□□□□ 0.25
VARSP26640 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.62■□□□□ 0.25
VARSP26640 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.62■□□□□ 0.25
VARSP26640 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.62■□□□□ 0.25
VARSP26640 TERC-201ENST00000602385 541 ntBASIC16.62■□□□□ 0.25
VARSP26640 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.62■□□□□ 0.25
VARSP26640 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
VARSP26640 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.62■□□□□ 0.25
VARSP26640 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.62■□□□□ 0.25
VARSP26640 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.62■□□□□ 0.25
VARSP26640 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VARSP26640 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VARSP26640 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.61■□□□□ 0.25
VARSP26640 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VARSP26640 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms