Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC005052.1-201ENST00000625181 2492 ntBASIC14.5□□□□□ -0.09
CCL1P22362 AL353732.1-201ENST00000569618 1459 ntBASIC14.5□□□□□ -0.09
CCL1P22362 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.5□□□□□ -0.09
CCL1P22362 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCL1P22362 PCDHA1-201ENST00000378133 2726 ntBASIC14.5□□□□□ -0.09
CCL1P22362 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
CCL1P22362 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.49□□□□□ -0.09
CCL1P22362 SLC22A20-204ENST00000530038 1673 ntBASIC14.49□□□□□ -0.09
CCL1P22362 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCL1P22362 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.49□□□□□ -0.09
CCL1P22362 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CCL1P22362 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.49□□□□□ -0.09
CCL1P22362 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CCL1P22362 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 SAPCD2P3-201ENST00000455031 850 ntBASIC14.49□□□□□ -0.09
CCL1P22362 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.49□□□□□ -0.09
CCL1P22362 AC021087.4-201ENST00000563761 564 ntBASIC14.49□□□□□ -0.09
CCL1P22362 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.49□□□□□ -0.09
CCL1P22362 AC107918.4-202ENST00000641623 219 ntBASIC14.49□□□□□ -0.09
CCL1P22362 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCL1P22362 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.49□□□□□ -0.09
CCL1P22362 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.49□□□□□ -0.09
CCL1P22362 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CCL1P22362 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CCL1P22362 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CCL1P22362 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL1P22362 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL1P22362 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CCL1P22362 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CCL1P22362 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.48□□□□□ -0.09
CCL1P22362 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.48□□□□□ -0.09
CCL1P22362 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL1P22362 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL1P22362 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.48□□□□□ -0.09
CCL1P22362 KRT18P27-201ENST00000427733 1299 ntBASIC14.48□□□□□ -0.09
CCL1P22362 PMS2P1-201ENST00000431037 1228 ntBASIC14.48□□□□□ -0.09
CCL1P22362 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL1P22362 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL1P22362 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL1P22362 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.48□□□□□ -0.09
CCL1P22362 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.48□□□□□ -0.09
CCL1P22362 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.48□□□□□ -0.09
CCL1P22362 CYP2A7P1-201ENST00000595391 815 ntBASIC14.48□□□□□ -0.09
CCL1P22362 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL1P22362 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.48□□□□□ -0.09
CCL1P22362 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL1P22362 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CCL1P22362 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL1P22362 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.48□□□□□ -0.09
CCL1P22362 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CCL1P22362 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.48□□□□□ -0.09
CCL1P22362 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.48□□□□□ -0.09
CCL1P22362 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
CCL1P22362 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCL1P22362 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CCL1P22362 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL1P22362 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms