Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RAB4AP20338 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 AC026271.3-201ENST00000571884 352 ntBASIC12.97□□□□□ -0.33
RAB4AP20338 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC12.97□□□□□ -0.33
RAB4AP20338 MIR5787-201ENST00000611784 55 ntBASIC12.97□□□□□ -0.33
RAB4AP20338 IKBKGP1-201ENST00000612193 1073 ntBASIC12.97□□□□□ -0.33
RAB4AP20338 AC133041.1-202ENST00000642053 222 ntBASIC12.97□□□□□ -0.33
RAB4AP20338 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RAB4AP20338 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.97□□□□□ -0.33
RAB4AP20338 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RAB4AP20338 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RAB4AP20338 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RAB4AP20338 KRT16P1-201ENST00000399124 1418 ntBASIC12.96□□□□□ -0.33
RAB4AP20338 HOXB1-202ENST00000577092 1414 ntBASIC12.96□□□□□ -0.33
RAB4AP20338 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB4AP20338 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB4AP20338 AC026748.1-201ENST00000624349 3251 ntBASIC12.96□□□□□ -0.33
RAB4AP20338 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB4AP20338 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB4AP20338 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB4AP20338 AC132938.6-201ENST00000623828 1655 ntBASIC12.96□□□□□ -0.33
RAB4AP20338 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RAB4AP20338 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB4AP20338 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RAB4AP20338 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
RAB4AP20338 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB4AP20338 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB4AP20338 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.96□□□□□ -0.33
RAB4AP20338 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
RAB4AP20338 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 AC009065.1-201ENST00000564055 1225 ntBASIC12.96□□□□□ -0.33
RAB4AP20338 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB4AP20338 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.96□□□□□ -0.33
RAB4AP20338 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RAB4AP20338 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RAB4AP20338 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.96□□□□□ -0.33
RAB4AP20338 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.96□□□□□ -0.34
RAB4AP20338 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
RAB4AP20338 AC060834.1-201ENST00000443027 2032 ntBASIC12.96□□□□□ -0.34
RAB4AP20338 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC12.96□□□□□ -0.34
RAB4AP20338 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.96□□□□□ -0.34
RAB4AP20338 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
RAB4AP20338 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
RAB4AP20338 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
RAB4AP20338 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 AC016396.2-201ENST00000562575 1417 ntBASIC12.96□□□□□ -0.34
RAB4AP20338 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.96□□□□□ -0.34
RAB4AP20338 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
RAB4AP20338 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RAB4AP20338 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RAB4AP20338 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
RAB4AP20338 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB4AP20338 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB4AP20338 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.95□□□□□ -0.34
RAB4AP20338 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RAB4AP20338 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.95□□□□□ -0.34
RAB4AP20338 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms