Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.84□□□□□ -0.03
ATF1P18846 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ATF1P18846 AC016734.2-201ENST00000624325 1377 ntBASIC14.84□□□□□ -0.03
ATF1P18846 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
ATF1P18846 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
ATF1P18846 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATF1P18846 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.83□□□□□ -0.03
ATF1P18846 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ATF1P18846 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.83□□□□□ -0.03
ATF1P18846 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
ATF1P18846 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.83□□□□□ -0.04
ATF1P18846 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ATF1P18846 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.83□□□□□ -0.04
ATF1P18846 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.83□□□□□ -0.04
ATF1P18846 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.83□□□□□ -0.04
ATF1P18846 AP005901.3-202ENST00000581653 237 ntBASIC14.83□□□□□ -0.04
ATF1P18846 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 AC073592.5-201ENST00000624854 528 ntBASIC14.83□□□□□ -0.04
ATF1P18846 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.83□□□□□ -0.04
ATF1P18846 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ATF1P18846 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ATF1P18846 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 AC023824.1-201ENST00000562945 2975 ntBASIC14.83□□□□□ -0.04
ATF1P18846 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.83□□□□□ -0.04
ATF1P18846 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.83□□□□□ -0.04
ATF1P18846 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.83□□□□□ -0.04
ATF1P18846 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
ATF1P18846 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ATF1P18846 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ATF1P18846 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.83□□□□□ -0.04
ATF1P18846 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 TP73-AS1-210ENST00000637775 1455 ntBASIC14.82□□□□□ -0.04
ATF1P18846 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ATF1P18846 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 AC006538.1-201ENST00000567905 1585 ntBASIC14.82□□□□□ -0.04
ATF1P18846 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ATF1P18846 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.82□□□□□ -0.04
ATF1P18846 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
ATF1P18846 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.82□□□□□ -0.04
ATF1P18846 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.82□□□□□ -0.04
ATF1P18846 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 TUBB8P12-201ENST00000308911 1335 ntBASIC14.82□□□□□ -0.04
ATF1P18846 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 TUBB7P-202ENST00000428444 1305 ntBASIC14.82□□□□□ -0.04
ATF1P18846 TUBB8P7-204ENST00000567960 1332 ntBASIC14.82□□□□□ -0.04
ATF1P18846 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
ATF1P18846 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ATF1P18846 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.82□□□□□ -0.04
ATF1P18846 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms