Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TOP1P11387 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TOP1P11387 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TOP1P11387 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TOP1P11387 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
TOP1P11387 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.77■□□□□ 0.76
TOP1P11387 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TOP1P11387 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TOP1P11387 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.77■□□□□ 0.76
TOP1P11387 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.77■□□□□ 0.76
TOP1P11387 AP002472.1-201ENST00000577490 586 ntBASIC19.77■□□□□ 0.76
TOP1P11387 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.77■□□□□ 0.76
TOP1P11387 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 SLC22A20-204ENST00000530038 1673 ntBASIC19.77■□□□□ 0.76
TOP1P11387 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.77■□□□□ 0.76
TOP1P11387 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TOP1P11387 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TOP1P11387 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
TOP1P11387 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.77■□□□□ 0.75
TOP1P11387 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TOP1P11387 AL121761.2-201ENST00000598007 1648 ntBASIC19.76■□□□□ 0.75
TOP1P11387 AC092919.2-201ENST00000623631 1645 ntBASIC19.76■□□□□ 0.75
TOP1P11387 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
TOP1P11387 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TOP1P11387 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TOP1P11387 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TOP1P11387 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TOP1P11387 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TOP1P11387 TNRC18P3-201ENST00000441896 2691 ntBASIC19.76■□□□□ 0.75
TOP1P11387 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TOP1P11387 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
TOP1P11387 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TOP1P11387 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TOP1P11387 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TOP1P11387 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TOP1P11387 HMGA1P7-201ENST00000406908 502 ntBASIC19.76■□□□□ 0.75
TOP1P11387 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.76■□□□□ 0.75
TOP1P11387 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.76■□□□□ 0.75
TOP1P11387 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.76■□□□□ 0.75
TOP1P11387 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.76■□□□□ 0.75
TOP1P11387 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.76■□□□□ 0.75
TOP1P11387 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.76■□□□□ 0.75
TOP1P11387 OR6D1P-203ENST00000641209 4860 ntBASIC19.76■□□□□ 0.75
TOP1P11387 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TOP1P11387 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TOP1P11387 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.76■□□□□ 0.75
TOP1P11387 AC012569.1-201ENST00000591191 1524 ntBASIC19.76■□□□□ 0.75
TOP1P11387 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TOP1P11387 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.75■□□□□ 0.75
TOP1P11387 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TOP1P11387 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP1P11387 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TOP1P11387 HCG4-201ENST00000418983 998 ntBASIC19.75■□□□□ 0.75
TOP1P11387 FAM58CP-201ENST00000435741 640 ntBASIC19.75■□□□□ 0.75
TOP1P11387 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.75■□□□□ 0.75
TOP1P11387 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.75■□□□□ 0.75
TOP1P11387 MPDU1-223ENST00000582151 728 ntBASIC19.75■□□□□ 0.75
TOP1P11387 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.75■□□□□ 0.75
TOP1P11387 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 AL691403.2-201ENST00000618460 490 ntBASIC19.75■□□□□ 0.75
TOP1P11387 AC091812.2-201ENST00000619081 385 ntBASIC19.75■□□□□ 0.75
TOP1P11387 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.75■□□□□ 0.75
TOP1P11387 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP1P11387 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP1P11387 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP1P11387 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TOP1P11387 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.74■□□□□ 0.75
TOP1P11387 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP1P11387 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
TOP1P11387 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP1P11387 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms