Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXC6P09630 AC008738.7-201ENST00000609744 511 ntBASIC18.88■□□□□ 0.61
HOXC6P09630 MIR6752-201ENST00000618442 71 ntBASIC18.88■□□□□ 0.61
HOXC6P09630 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HOXC6P09630 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC6P09630 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC6P09630 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC6P09630 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HOXC6P09630 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 AC116353.5-201ENST00000638148 1699 ntBASIC18.88■□□□□ 0.61
HOXC6P09630 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXC6P09630 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXC6P09630 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXC6P09630 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXC6P09630 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
HOXC6P09630 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HOXC6P09630 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXC6P09630 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXC6P09630 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HOXC6P09630 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.87■□□□□ 0.61
HOXC6P09630 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXC6P09630 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXC6P09630 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXC6P09630 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXC6P09630 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXC6P09630 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.87■□□□□ 0.61
HOXC6P09630 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXC6P09630 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HOXC6P09630 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HOXC6P09630 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.86■□□□□ 0.61
HOXC6P09630 RPL37AP1-201ENST00000412502 279 ntBASIC18.86■□□□□ 0.61
HOXC6P09630 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXC6P09630 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXC6P09630 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXC6P09630 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXC6P09630 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC6P09630 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.86■□□□□ 0.61
HOXC6P09630 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXC6P09630 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 CETN4P-206ENST00000642099 2168 ntBASIC18.86■□□□□ 0.61
HOXC6P09630 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXC6P09630 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC6P09630 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC6P09630 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC6P09630 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 AL353779.1-201ENST00000434793 351 ntBASIC18.85■□□□□ 0.61
HOXC6P09630 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC6P09630 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.85■□□□□ 0.61
HOXC6P09630 ZNF890P-202ENST00000530367 1156 ntBASIC18.85■□□□□ 0.61
HOXC6P09630 API5-211ENST00000534695 560 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC6P09630 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.85■□□□□ 0.61
HOXC6P09630 RN7SL828P-201ENST00000607615 303 ntBASIC18.85■□□□□ 0.61
HOXC6P09630 SPTSSB-204ENST00000617024 1292 ntBASIC18.85■□□□□ 0.61
HOXC6P09630 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.85■□□□□ 0.61
HOXC6P09630 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HOXC6P09630 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC6P09630 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HOXC6P09630 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms