Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.67■□□□□ 0.42
RB1P06400 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
RB1P06400 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.67■□□□□ 0.42
RB1P06400 AL512384.1-201ENST00000406683 331 ntBASIC17.67■□□□□ 0.42
RB1P06400 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 INE1-201ENST00000456273 945 ntBASIC17.67■□□□□ 0.42
RB1P06400 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 AC093004.1-201ENST00000508850 424 ntBASIC17.67■□□□□ 0.42
RB1P06400 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
RB1P06400 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 AL133215.2-201ENST00000609242 977 ntBASIC17.67■□□□□ 0.42
RB1P06400 IGHV3-72-202ENST00000621503 303 ntBASIC17.67■□□□□ 0.42
RB1P06400 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.67■□□□□ 0.42
RB1P06400 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RB1P06400 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RB1P06400 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RB1P06400 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RB1P06400 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 AC073439.1-201ENST00000624121 1774 ntBASIC17.66■□□□□ 0.42
RB1P06400 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RB1P06400 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RB1P06400 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.66■□□□□ 0.42
RB1P06400 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.66■□□□□ 0.42
RB1P06400 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RB1P06400 BANF1P1-201ENST00000553684 263 ntBASIC17.66■□□□□ 0.42
RB1P06400 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.66■□□□□ 0.42
RB1P06400 AC010336.2-201ENST00000564226 506 ntBASIC17.66■□□□□ 0.42
RB1P06400 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.66■□□□□ 0.42
RB1P06400 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.66■□□□□ 0.42
RB1P06400 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.66■□□□□ 0.42
RB1P06400 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RB1P06400 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.66■□□□□ 0.42
RB1P06400 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RB1P06400 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.65■□□□□ 0.42
RB1P06400 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.65■□□□□ 0.42
RB1P06400 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.65■□□□□ 0.42
RB1P06400 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
RB1P06400 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RB1P06400 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 SLC25A1P3-201ENST00000395415 828 ntBASIC17.65■□□□□ 0.42
RB1P06400 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RB1P06400 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 AL080243.2-201ENST00000418783 582 ntBASIC17.65■□□□□ 0.42
RB1P06400 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.65■□□□□ 0.42
RB1P06400 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RB1P06400 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.65■□□□□ 0.42
RB1P06400 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms