Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 AC012569.1-201ENST00000591191 1524 ntBASIC18.1■□□□□ 0.49
HLA-DRAP01903 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 MED15P5-201ENST00000423150 992 ntBASIC18.1■□□□□ 0.49
HLA-DRAP01903 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 AP000347.1-202ENST00000435868 847 ntBASIC18.1■□□□□ 0.49
HLA-DRAP01903 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 MIR4515-201ENST00000584082 81 ntBASIC18.1■□□□□ 0.49
HLA-DRAP01903 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.1■□□□□ 0.49
HLA-DRAP01903 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.1■□□□□ 0.49
HLA-DRAP01903 AL139011.1-202ENST00000642063 584 ntBASIC18.1■□□□□ 0.49
HLA-DRAP01903 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HLA-DRAP01903 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRAP01903 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRAP01903 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRAP01903 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRAP01903 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRAP01903 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 AP001350.2-201ENST00000625104 1094 ntBASIC18.09■□□□□ 0.49
HLA-DRAP01903 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRAP01903 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRAP01903 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HLA-DRAP01903 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.09■□□□□ 0.49
HLA-DRAP01903 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
HLA-DRAP01903 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DRAP01903 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DRAP01903 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DRAP01903 OR6D1P-203ENST00000641209 4860 ntBASIC18.08■□□□□ 0.49
HLA-DRAP01903 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DRAP01903 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DRAP01903 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DRAP01903 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.08■□□□□ 0.49
HLA-DRAP01903 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HLA-DRAP01903 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DRAP01903 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DRAP01903 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DRAP01903 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DRAP01903 HMGA1P7-201ENST00000406908 502 ntBASIC18.08■□□□□ 0.48
HLA-DRAP01903 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HLA-DRAP01903 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.08■□□□□ 0.48
HLA-DRAP01903 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DRAP01903 AL591424.1-201ENST00000442569 1213 ntBASIC18.08■□□□□ 0.48
HLA-DRAP01903 KRT18P3-201ENST00000451602 1288 ntBASIC18.08■□□□□ 0.48
HLA-DRAP01903 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.08■□□□□ 0.48
HLA-DRAP01903 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DRAP01903 FAM197Y3-203ENST00000618346 717 ntBASIC18.08■□□□□ 0.48
HLA-DRAP01903 AC004877.2-201ENST00000623941 599 ntBASIC18.08■□□□□ 0.48
HLA-DRAP01903 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HLA-DRAP01903 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DRAP01903 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.08■□□□□ 0.48
HLA-DRAP01903 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HLA-DRAP01903 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 BCAR1-209ENST00000546196 1340 ntBASIC18.07■□□□□ 0.48
HLA-DRAP01903 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HLA-DRAP01903 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HLA-DRAP01903 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.07■□□□□ 0.48
HLA-DRAP01903 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HLA-DRAP01903 MIR574-201ENST00000385209 96 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms