Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.51■□□□□ 0.55
CD4P01730 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.51■□□□□ 0.55
CD4P01730 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.51■□□□□ 0.55
CD4P01730 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.51■□□□□ 0.55
CD4P01730 AC007967.4-201ENST00000614700 386 ntBASIC18.51■□□□□ 0.55
CD4P01730 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.51■□□□□ 0.55
CD4P01730 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CD4P01730 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CD4P01730 AP3S2-216ENST00000617003 1561 ntBASIC18.51■□□□□ 0.55
CD4P01730 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CD4P01730 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.5■□□□□ 0.55
CD4P01730 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
CD4P01730 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CD4P01730 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.5■□□□□ 0.55
CD4P01730 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.5■□□□□ 0.55
CD4P01730 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.5■□□□□ 0.55
CD4P01730 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.5■□□□□ 0.55
CD4P01730 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.5■□□□□ 0.55
CD4P01730 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.5■□□□□ 0.55
CD4P01730 AC073389.1-201ENST00000595595 795 ntBASIC18.5■□□□□ 0.55
CD4P01730 AC004233.3-201ENST00000607794 1269 ntBASIC18.5■□□□□ 0.55
CD4P01730 AL133373.2-201ENST00000623187 2828 ntBASIC18.5■□□□□ 0.55
CD4P01730 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CD4P01730 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.5■□□□□ 0.55
CD4P01730 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.5■□□□□ 0.55
CD4P01730 AC067852.2-201ENST00000590513 2313 ntBASIC18.5■□□□□ 0.55
CD4P01730 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.5■□□□□ 0.55
CD4P01730 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.5■□□□□ 0.55
CD4P01730 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD4P01730 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
CD4P01730 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CD4P01730 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.49■□□□□ 0.55
CD4P01730 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CD4P01730 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CD4P01730 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CD4P01730 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.49■□□□□ 0.55
CD4P01730 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.49■□□□□ 0.55
CD4P01730 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.49■□□□□ 0.55
CD4P01730 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.49■□□□□ 0.55
CD4P01730 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CD4P01730 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.49■□□□□ 0.55
CD4P01730 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CD4P01730 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.49■□□□□ 0.55
CD4P01730 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
CD4P01730 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.49■□□□□ 0.55
CD4P01730 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD4P01730 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.49■□□□□ 0.55
CD4P01730 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.48■□□□□ 0.55
CD4P01730 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.48■□□□□ 0.55
CD4P01730 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.48■□□□□ 0.55
CD4P01730 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CD4P01730 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 HLA-V-201ENST00000429037 534 ntBASIC18.48■□□□□ 0.55
CD4P01730 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD4P01730 AC009477.1-201ENST00000452936 217 ntBASIC18.48■□□□□ 0.55
CD4P01730 HLA-V-204ENST00000476601 1289 ntBASIC18.48■□□□□ 0.55
CD4P01730 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.48■□□□□ 0.55
CD4P01730 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.48■□□□□ 0.55
CD4P01730 AC105233.2-201ENST00000523697 349 ntBASIC18.48■□□□□ 0.55
CD4P01730 AF228730.5-201ENST00000530288 346 ntBASIC18.48■□□□□ 0.55
CD4P01730 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.48■□□□□ 0.55
CD4P01730 MIR6752-201ENST00000618442 71 ntBASIC18.48■□□□□ 0.55
CD4P01730 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms