Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TIMP1P01033 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TIMP1P01033 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TIMP1P01033 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.98■□□□□ 0.47
TIMP1P01033 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TIMP1P01033 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
TIMP1P01033 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.98■□□□□ 0.47
TIMP1P01033 SPDYE17-201ENST00000412399 783 ntBASIC17.98■□□□□ 0.47
TIMP1P01033 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.98■□□□□ 0.47
TIMP1P01033 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TIMP1P01033 AC093726.1-201ENST00000608064 963 ntBASIC17.98■□□□□ 0.47
TIMP1P01033 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.98■□□□□ 0.47
TIMP1P01033 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.98■□□□□ 0.47
TIMP1P01033 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.98■□□□□ 0.47
TIMP1P01033 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TIMP1P01033 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TIMP1P01033 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.98■□□□□ 0.47
TIMP1P01033 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TIMP1P01033 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TIMP1P01033 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMP1P01033 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.97■□□□□ 0.47
TIMP1P01033 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
TIMP1P01033 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TIMP1P01033 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
TIMP1P01033 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TIMP1P01033 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 AC098850.1-201ENST00000419919 790 ntBASIC17.97■□□□□ 0.47
TIMP1P01033 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.97■□□□□ 0.47
TIMP1P01033 SLC25A6P5-201ENST00000435663 894 ntBASIC17.97■□□□□ 0.47
TIMP1P01033 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.97■□□□□ 0.47
TIMP1P01033 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.97■□□□□ 0.47
TIMP1P01033 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TIMP1P01033 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.97■□□□□ 0.47
TIMP1P01033 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TIMP1P01033 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.97■□□□□ 0.47
TIMP1P01033 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.97■□□□□ 0.47
TIMP1P01033 TNXA-203ENST00000507684 2038 ntBASIC17.97■□□□□ 0.47
TIMP1P01033 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 AL133338.1-201ENST00000565695 1517 ntBASIC17.97■□□□□ 0.47
TIMP1P01033 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.97■□□□□ 0.47
TIMP1P01033 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
TIMP1P01033 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TIMP1P01033 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMP1P01033 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 AC009113.1-201ENST00000570267 2443 ntBASIC17.96■□□□□ 0.47
TIMP1P01033 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TIMP1P01033 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.96■□□□□ 0.47
TIMP1P01033 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMP1P01033 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMP1P01033 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.96■□□□□ 0.47
TIMP1P01033 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.96■□□□□ 0.47
TIMP1P01033 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.96■□□□□ 0.47
TIMP1P01033 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.96■□□□□ 0.47
TIMP1P01033 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.96■□□□□ 0.47
TIMP1P01033 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.96■□□□□ 0.47
TIMP1P01033 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMP1P01033 AC024267.1-201ENST00000582320 895 ntBASIC17.96■□□□□ 0.47
TIMP1P01033 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.96■□□□□ 0.47
TIMP1P01033 WFDC1-204ENST00000613603 549 ntBASIC17.96■□□□□ 0.47
TIMP1P01033 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.96■□□□□ 0.47
TIMP1P01033 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TIMP1P01033 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.96■□□□□ 0.47
TIMP1P01033 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TIMP1P01033 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TIMP1P01033 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TIMP1P01033 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms